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Intron Name: Anas_platyrhynchos_platyrhynchos_29_1366808_1367209_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1366808 - 1367209

Intron Length:

402

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTGAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

TGTGCCGTGGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCCCAC

U12 Branch Point Sequence:

CCCCACCCAGCT

Flanking Amino Acid:

WTAPEALKHNKFSSKSDVWS

Intron Amino Acid Position:

359

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

79.5

28.4

Major BPS

-0.3

1.2

49.7

35.3

Major PPT

63.2

0.3

1.1

57.9

43.1

Minor 5ss

31.3

-2.1

3.3

44.6

43.6

Minor BPS

36.5

-0.9

47.36

44.4

Associated Gene:

Gene:

MATK

Ensembl Gene ID:

ENSAPLG00000003263

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003378

1363510 - 1375228

11719