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Intron Name: Anas_platyrhynchos_platyrhynchos_29_1367406_1367492_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1367406 - 1367492

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTAAGTGCC

5'SS Class:

major

3'SS Sequence:

CTCGCCACCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGACAC

U12 Branch Point Sequence:

CTCGCCACCACA

Flanking Amino Acid:

VTPQQLLQFSLDVAQGMDYL

Intron Amino Acid Position:

293

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.8

0.56

1.1

67.9

38.9

Major BPS

-0.2

1.3

52.4

43.3

Major PPT

65.4

0.35

0.9

57.6

31.9

Minor 5ss

36.9

-1.5

3.3

42.2

Minor BPS

41.1

-0.7

2.2

51.88

Associated Gene:

Gene:

MATK

Ensembl Gene ID:

ENSAPLG00000003263

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003378

1363510 - 1375228

11719