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Intron Name: Anas_platyrhynchos_platyrhynchos_29_1367567_1367688_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1367567 - 1367688

Intron Length:

122

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAGCG

5'SS Class:

strong_major

3'SS Sequence:

CCTCCTCCGTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTTAG

U12 Branch Point Sequence:

CAGCTCTTAGGT

Flanking Amino Acid:

LYIVMEFMSKGNLVNFLRTR

Intron Amino Acid Position:

269

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

68.6

36.5

Major BPS

55.1

0.13

1.5

42.7

Major PPT

70.2

0.46

0.9

69.1

31.5

Minor 5ss

25.3

-2.8

3.1

30.1

43.1

Minor BPS

46.1

-0.2

1.9

57.8

45.1

Associated Gene:

Gene:

MATK

Ensembl Gene ID:

ENSAPLG00000003263

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003378

1363510 - 1375228

11719