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Intron Name: Anas_platyrhynchos_platyrhynchos_29_1368208_1368306_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1368208 - 1368306

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGGGAT

5'SS Class:

strong_major

3'SS Sequence:

CGCCTGTTCTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

CCTTTTTGACCT

Flanking Amino Acid:

MKSAEEELAKAGWLLNLQHL

Intron Amino Acid Position:

185

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

38.2

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

71.2

0.48

0.9

67.7

37.7

Minor 5ss

29.5

-2.3

3.8

45.4

49.7

Minor BPS

49.6

0.05

1.8

67.31

44.2

Associated Gene:

Gene:

MATK

Ensembl Gene ID:

ENSAPLG00000003263

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003378

1363510 - 1375228

11719