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Intron Name: Anas_platyrhynchos_platyrhynchos_29_1368401_1369499_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1368401 - 1369499

Intron Length:

1099

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGAGCC

5'SS Class:

strong_major

3'SS Sequence:

CCTCCCTCTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACCCAC

U12 Branch Point Sequence:

CCTGCCCCAGCC

Flanking Amino Acid:

RFYNLIDMIEHYTKEQGAIC

Intron Amino Acid Position:

154

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.8

72.1

31.2

Major BPS

46.9

-0.1

1.1

53.7

32.6

Major PPT

0.65

0.7

72.6

25.5

Minor 5ss

26.3

-2.7

3.1

33.4

Minor BPS

41.7

-0.6

2.1

50.97

45.8

Associated Gene:

Gene:

MATK

Ensembl Gene ID:

ENSAPLG00000003263

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003378

1363510 - 1375228

11719