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Intron Name: Anas_platyrhynchos_platyrhynchos_29_1373547_1375078_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

1373547 - 1375078

Intron Length:

1532

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTCAG

5'SS Class:

strong_major

3'SS Sequence:

TTTGACTGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

TAATGTTTGACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.71

1.1

68.8

43.8

Major BPS

71.2

0.53

70.3

31.9

Major PPT

75.4

0.57

69.6

41.2

Minor 5ss

39.1

-1.2

2.9

49.5

46.7

Minor BPS

60.6

0.41

1.8

76.46

40.3

Associated Gene:

Gene:

MATK

Ensembl Gene ID:

ENSAPLG00000003263

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003378

1363510 - 1375228

11719