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Intron Name: Anas_platyrhynchos_platyrhynchos_29_138710_138910_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

138710 - 138910

Intron Length:

201

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGGGTGCA

5'SS Class:

major

3'SS Sequence:

TCCGGGGCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAC

U12 Branch Point Sequence:

GGCTCCTGACGG

Flanking Amino Acid:

AAAGVAPVQARFVASRERFH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.1

0.52

1.1

62.4

38.2

Major BPS

68.9

0.47

59.2

39.1

Major PPT

0.27

53.2

41.6

Minor 5ss

26.6

-2.7

3.2

32.2

42.4

Minor BPS

43.6

-0.6

45.56

46.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004636

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004778

138672 - 145819

7148