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Intron Name: Anas_platyrhynchos_platyrhynchos_29_1391808_1394404_R

Intron Information:

Intron Rank:

155302

Intron Class:

major

Intron Phase:

Intron Coordinates:

1391808 - 1394404

Intron Length:

2597

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGGGTGAC

5'SS Class:

major

3'SS Sequence:

TTTTTTCCCTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTGAT

U12 Branch Point Sequence:

TAACCATTACAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.8

0.56

64.5

35.6

Major BPS

0.85

0.9

39.9

Major PPT

89.8

0.9

0.6

89.3

19.6

Minor 5ss

26.3

-2.7

3.3

30.2

37.6

Minor BPS

47.5

-0.1

1.9

66.76

42.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000031036

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029829

1391765 - 1396507

4743