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Intron Name: Anas_platyrhynchos_platyrhynchos_29_1395944_1396374_R

Intron Information:

Intron Rank:

155304

Intron Class:

major

Intron Phase:

Intron Coordinates:

1395944 - 1396374

Intron Length:

431

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATTGC

5'SS Class:

strong_major

3'SS Sequence:

TTTTACCTCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTTAC

U12 Branch Point Sequence:

AGACCCTGAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

75.6

35.3

Major BPS

68.8

0.47

1.2

63.4

Major PPT

83.9

0.76

0.8

81.6

Minor 5ss

39.9

-1.1

2.9

44.2

Minor BPS

61.8

0.37

1.5

66.86

38.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000031036

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030130

1395664 - 1396570

907

ENSAPLT00000029829

1391765 - 1396507

4743