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Intron Name: Anas_platyrhynchos_platyrhynchos_29_140218_140847_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

140218 - 140847

Intron Length:

630

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCAGT

5'SS Class:

strong_major

3'SS Sequence:

GGTTATTTTCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

GCTCTGTTAATG

Flanking Amino Acid:

VKLRPCEKKKLEIQGKLYLA

Intron Amino Acid Position:

306

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

77.8

38.7

Major BPS

84.4

0.85

34.5

Major PPT

0.65

69.4

45.7

Minor 5ss

35.7

-1.6

48.8

Minor BPS

47.6

-0.3

2.1

52.64

42.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004636

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044914

137831 - 145687

7857

ENSAPLT00000004778

138672 - 145819

7148