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Intron Name: Anas_platyrhynchos_platyrhynchos_29_141332_141680_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

141332 - 141680

Intron Length:

349

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGATGT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTCAC

U12 Branch Point Sequence:

AAAGTCTTCACG

Flanking Amino Acid:

GCPIDLVYKKGGGCALMTRT

Intron Amino Acid Position:

410

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.6

0.98

0.8

81.6

33.2

Major BPS

77.5

0.68

79.6

Major PPT

91.6

0.94

0.6

84.9

29.9

Minor 5ss

39.7

-1.2

3.1

56.6

47.5

Minor BPS

47.6

-0.3

1.9

51.2

43.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004636

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044914

137831 - 145687

7857

ENSAPLT00000004778

138672 - 145819

7148