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Intron Name: Anas_platyrhynchos_platyrhynchos_29_143295_143593_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

143295 - 143593

Intron Length:

299

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCAAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

AATTTTGCTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

GCACATTTAATT

Flanking Amino Acid:

QMGVSGIMIARGALIKPWLF

Intron Amino Acid Position:

526

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.16

0.7

88.8

25.1

Major BPS

90.7

1.01

0.7

19.9

Major PPT

76.6

0.6

69.7

40.8

Minor 5ss

22.7

-3.1

3.9

34.8

41.6

Minor BPS

53.2

0.18

1.5

63.98

40.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004636

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044914

137831 - 145687

7857

ENSAPLT00000004778

138672 - 145819

7148