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Intron Name: Anas_platyrhynchos_platyrhynchos_29_1442854_1464151_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1442854 - 1464151

Intron Length:

21298

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

TGTGTTGGAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGAAT

U12 Branch Point Sequence:

CTTACTTTAACT

Flanking Amino Acid:

NSRVLVDQTTDSDPKSSPCM

Intron Amino Acid Position:

201

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.01

0.7

86.6

23.3

Major BPS

74.6

0.61

1.4

34.5

Major PPT

62.6

0.28

1.2

57.9

46.4

Minor 5ss

37.4

-1.4

2.9

50.4

Minor BPS

0.99

1.2

88.46

36.7

Associated Gene:

Gene:

ELAVL1

Ensembl Gene ID:

ENSAPLG00000003139

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031438

1414660 - 1464252

49593