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Intron Name: Anas_platyrhynchos_platyrhynchos_29_1446545_1453641_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1446545 - 1453641

Intron Length:

7097

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTTAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTATTTGCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTACATGAAAT

Flanking Amino Acid:

GPVHHQAQRFRFSPMGVDHM

Intron Amino Acid Position:

276

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.7

0.84

74.9

38.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

78.1

0.63

73.8

41.4

Minor 5ss

38.1

-1.3

3.1

48.2

47.9

Minor BPS

56.8

0.29

1.9

81.03

39.5

Associated Gene:

Gene:

ELAVL1

Ensembl Gene ID:

ENSAPLG00000003139

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003195

1414646 - 1453966

39321