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Intron Name: Anas_platyrhynchos_platyrhynchos_29_1477963_1480015_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1477963 - 1480015

Intron Length:

2053

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGTCTC

5'SS Class:

major

3'SS Sequence:

TTCTCTCTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCCTCAC

U12 Branch Point Sequence:

TGGCCACCAACT

Flanking Amino Acid:

ITLIVAVDWALDRFRTMTNV

Intron Amino Acid Position:

458

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.5

0.58

1.1

69.5

41.3

Major BPS

54.7

0.12

1.2

59.2

39.1

Major PPT

84.1

0.77

0.7

77.3

31.4

Minor 5ss

41.7

-0.9

3.1

63.6

40.6

Minor BPS

44.8

-0.3

2.1

65.27

44.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002793

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029642

1477773 - 1492693

14921

ENSAPLT00000027514

1472773 - 1492597

19825

ENSAPLT00000002867

1472773 - 1492597

19825

ENSAPLT00000031844

1477773 - 1492597

14825