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Intron Name: Anas_platyrhynchos_platyrhynchos_29_1482017_1482572_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1482017 - 1482572

Intron Length:

556

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGC|GTACGGCTG

5'SS Class:

weak_major

3'SS Sequence:

GCATCTCCTGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GAAGCAT

U12 Branch Point Sequence:

TCCCTCGGAAGC

Flanking Amino Acid:

SGLAVGDLAAPTTVLPGTGP

Intron Amino Acid Position:

362

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.4

0.06

1.4

46.3

Major BPS

45.1

-0.3

1.5

51.7

43.9

Major PPT

68.9

0.43

0.9

62.6

34.3

Minor 5ss

34.2

-1.8

3.6

42.2

44.9

Minor BPS

39.8

-0.7

2.2

47.43

42.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002793

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027514

1472773 - 1492597

19825