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Intron Name: Anas_platyrhynchos_platyrhynchos_29_1486970_1490545_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1486970 - 1490545

Intron Length:

3576

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGACAT

5'SS Class:

strong_major

3'SS Sequence:

TGCTCTCTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTAAC

U12 Branch Point Sequence:

CACGCTTTAACC

Flanking Amino Acid:

KMLILPLITSRNMFPSNLIE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.1

0.97

0.8

80.7

33.7

Major BPS

77.3

0.68

79.3

29.4

Major PPT

82.3

0.73

0.8

32.6

Minor 5ss

33.6

-1.9

3.2

47.4

Minor BPS

62.1

0.36

1.5

62.62

43.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002793

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031844

1477773 - 1492597

14825