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Intron Name: Anas_platyrhynchos_platyrhynchos_29_1487780_1490545_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1487780 - 1490545

Intron Length:

2766

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGACAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTGGTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

AGATGCTGACCA

Flanking Amino Acid:

KMLILPLITSSLMSGLATMD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.1

0.97

0.8

80.7

33.7

Major BPS

66.3

0.4

1.1

41.8

Major PPT

80.8

0.69

76.8

37.3

Minor 5ss

33.6

-1.9

3.2

47.4

Minor BPS

45.4

-0.3

2.1

56.53

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002793

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029642

1477773 - 1492693

14921

ENSAPLT00000027514

1472773 - 1492597

19825

ENSAPLT00000002867

1472773 - 1492597

19825