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Intron Name: Anas_platyrhynchos_platyrhynchos_29_1490623_1492462_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1490623 - 1492462

Intron Length:

1840

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGGTGC

5'SS Class:

strong_major

3'SS Sequence:

CTCTGTGCAGGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AGCTGAC

U12 Branch Point Sequence:

TCCCAGCTGACA

Flanking Amino Acid:

LLRALELTELKQYFSFPGEL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

66.6

39.9

Major BPS

57.5

0.19

1.1

48.8

38.1

Major PPT

47.9

-0.1

1.7

54.4

40.3

Minor 5ss

37.2

-1.4

3.3

46.9

Minor BPS

-0.8

2.3

49.53

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002793

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029642

1477773 - 1492693

14921