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Intron Name: Anas_platyrhynchos_platyrhynchos_29_1490662_1492483_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1490662 - 1492483

Intron Length:

1822

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CGG|GCGCTGGAG

5'SS Class:

weak_major

3'SS Sequence:

ATCCACTTCTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTAAC

U12 Branch Point Sequence:

GAGCCCTTAACC

Flanking Amino Acid:

TGCLLGFLLRLPADTPALLS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.5

0.01

1.3

42.9

41.8

Major BPS

64.7

0.37

1.1

67.2

35.2

Major PPT

72.9

0.52

0.9

69.3

35.9

Minor 5ss

11.4

-4.5

3.6

10.2

28.4

Minor BPS

71.5

0.66

1.3

70.4

40.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002793

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031844

1477773 - 1492597

14825

ENSAPLT00000027514

1472773 - 1492597

19825

ENSAPLT00000002867

1472773 - 1492597

19825