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Intron Name: Anas_platyrhynchos_platyrhynchos_29_1500999_1502554_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1500999 - 1502554

Intron Length:

1556

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTGAGGCCC

5'SS Class:

major

3'SS Sequence:

GCGGCGGTGGCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CGGTGGC

U12 Branch Point Sequence:

GCGGCGGTGGCA

Flanking Amino Acid:

TLASAAAGQSAGSEPAGPG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.7

0.28

1.1

50.4

40.5

Major BPS

17.4

-2

3.9

23.9

34.6

Major PPT

49.6

-0

1.1

41.7

43.1

Minor 5ss

28.6

-2.5

3.2

35.1

Minor BPS

24.6

-2

3.7

37.71

41.7

Associated Gene:

Gene:

POLE4

Ensembl Gene ID:

ENSAPLG00000028021

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029447

1500971 - 1503915

2945