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Intron Name: Anas_platyrhynchos_platyrhynchos_29_1515264_1515439_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1515264 - 1515439

Intron Length:

176

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGAGG

5'SS Class:

strong_major

3'SS Sequence:

CCTCCTTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAT

U12 Branch Point Sequence:

GGGTGCTCATTG

Flanking Amino Acid:

DGPKRHHFCQVSIYQILDKT

Intron Amino Acid Position:

167

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.5

42.7

Major BPS

79.7

0.74

79.6

35.6

Major PPT

76.4

0.6

0.7

68.4

31.9

Minor 5ss

26.2

-2.7

2.9

30.6

42.9

Minor BPS

40.4

-0.8

2.1

40.91

43.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017048

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045584

1514654 - 1517748

3095