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Intron Name: Anas_platyrhynchos_platyrhynchos_29_1516172_1516450_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1516172 - 1516450

Intron Length:

279

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TCGTTTGGGGTAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCTAAT

U12 Branch Point Sequence:

TGCTAATGGAAT

Flanking Amino Acid:

GASLPTADFPDLQPQDPVLP

Intron Amino Acid Position:

274

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.9

78.9

33.5

Major BPS

79.3

0.73

1.1

77.9

34.9

Major PPT

59.2

0.21

1.1

57.5

43.2

Minor 5ss

33.9

-1.8

3.5

49.9

46.5

Minor BPS

42.6

-0.5

60.41

42.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017048

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045584

1514654 - 1517748

3095