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Intron Name: Anas_platyrhynchos_platyrhynchos_29_1518607_1520361_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1518607 - 1520361

Intron Length:

1755

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTAAGGTGT

5'SS Class:

strong_major

3'SS Sequence:

ATTCCTCTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCTAT

U12 Branch Point Sequence:

TCCTTTCTATTC

Flanking Amino Acid:

SIPYAWWWAAVSLSTVGYGD

Intron Amino Acid Position:

419

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

70.8

41.9

Major BPS

73.8

0.59

1.3

72.8

Major PPT

78.3

0.64

0.8

69.8

35.9

Minor 5ss

38.9

-1.2

3.4

56.3

47.9

Minor BPS

45.3

-0.3

1.8

53.34

39.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011387

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011845

1518137 - 1521615

3479