Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_29_1524979_1525861_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1524979 - 1525861

Intron Length:

883

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTGAG

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTGTAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAATAAC

U12 Branch Point Sequence:

TTTCCTGTAACA

Flanking Amino Acid:

QGCTWVLIIAGIFCCEAIRW

Intron Amino Acid Position:

119

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.87

0.9

36.6

Major BPS

57.8

0.19

1.1

59.6

32.6

Major PPT

77.1

0.61

0.9

73.1

Minor 5ss

38.1

-1.3

3.1

48.2

47.9

Minor BPS

64.7

0.46

80.59

35.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000000921

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028655

1524944 - 1529889

4946