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Intron Name: Anas_platyrhynchos_platyrhynchos_29_1525509_1525861_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1525509 - 1525861

Intron Length:

353

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTGAG

5'SS Class:

strong_major

3'SS Sequence:

CTCTTCTCTTTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTGCAC

U12 Branch Point Sequence:

TGCTTGTGCACT

Flanking Amino Acid:

QGCTWVLIIAVLLSCLVAVG

Intron Amino Acid Position:

119

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.87

0.9

36.6

Major BPS

-0

1.5

63.1

44.5

Major PPT

82.3

0.73

0.7

81.1

24.1

Minor 5ss

38.1

-1.3

3.1

48.2

47.9

Minor BPS

-0.4

2.5

64.64

45.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000000921

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000000899

1525276 - 1529889

4614