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Intron Name: Anas_platyrhynchos_platyrhynchos_29_1527147_1529788_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1527147 - 1529788

Intron Length:

2642

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCC|GTACGCAGT

5'SS Class:

weak_major

3'SS Sequence:

GCCCCAGCCCCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCCTCAG

U12 Branch Point Sequence:

CTCCCCTCAGCC

Flanking Amino Acid:

VLGTSRPLPDPPSPGPSGCA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

54.8

0.11

1.4

55.1

49.1

Major BPS

48.4

-0.1

1.5

56.9

40.5

Major PPT

57.2

0.16

0.9

46.1

35.5

Minor 5ss

41.9

-0.9

3.2

61.5

43.3

Minor BPS

49.2

-0

1.9

60.11

44.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000000921

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028655

1524944 - 1529889

4946

ENSAPLT00000000899

1525276 - 1529889

4614