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Intron Name: Anas_platyrhynchos_platyrhynchos_29_1529254_1530060_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1529254 - 1530060

Intron Length:

807

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGCTGAAC

5'SS Class:

weak_major

3'SS Sequence:

GCAGTGACAACAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

CTTTTTCCATCC

Flanking Amino Acid:

EISKRYRGCCAEKKPVTPGP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.5

0.18

1.1

53.4

39.4

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

0.05

1.1

41.1

Minor 5ss

26.6

-2.7

3.2

Minor BPS

43.9

-0.4

58.34

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011378

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024918

1529180 - 1530258

1079