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Intron Name: Anas_platyrhynchos_platyrhynchos_29_1530267_1531464_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1530267 - 1531464

Intron Length:

1198

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTC|GTGGGCGAC

5'SS Class:

weak_major

3'SS Sequence:

CTGCCCTTCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCCCTT

U12 Branch Point Sequence:

CTGCCCTTCACA

Flanking Amino Acid:

MSALPAKMATATRI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.2

0.01

1.3

46.4

38.3

Major BPS

22.6

-1.7

52.1

45.2

Major PPT

74.1

0.54

0.8

67.8

32.3

Minor 5ss

31.3

-2.1

3.6

40.2

Minor BPS

60.3

0.32

1.8

68.47

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011378

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011833

1529180 - 1531477

2298