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Intron Name: Anas_platyrhynchos_platyrhynchos_29_153870_155539_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

3UTR

Intron Coordinates:

153870 - 155539

Intron Length:

1670

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTTGATCT

5'SS Class:

major

3'SS Sequence:

CCTGCTCCCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTATAC

U12 Branch Point Sequence:

CAAGCCTTATAC

Flanking Amino Acid:

3UTR

Intron Amino Acid Position:

3UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.9

0.52

1.2

36.2

Major BPS

0.17

1.1

56.4

39.2

Major PPT

71.5

0.48

0.8

64.4

31.1

Minor 5ss

-0.8

2.8

58.1

Minor BPS

47.8

-0.1

1.8

53.62

43.6

Associated Gene:

Gene:

RFX2

Ensembl Gene ID:

ENSAPLG00000004369

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025872

153664 - 185246

31583