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Intron Name: Anas_platyrhynchos_platyrhynchos_29_1550492_1558662_F

Intron Information:

Intron Rank:

144664

Intron Class:

major

Intron Phase:

Intron Coordinates:

1550492 - 1558662

Intron Length:

8171

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGAGCA

5'SS Class:

major

3'SS Sequence:

TCTCCCTGTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTGAT

U12 Branch Point Sequence:

TGTAAATTGATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.4

0.62

64.8

35.2

Major BPS

79.8

0.74

0.9

69.4

37.7

Major PPT

77.5

0.62

0.9

72.5

32.1

Minor 5ss

23.9

-3

3.3

29.9

43.2

Minor BPS

49.2

0.02

1.8

71.19

39.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027955

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017625

1550149 - 1558928

8780