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Intron Name: Anas_platyrhynchos_platyrhynchos_29_155683_155835_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

155683 - 155835

Intron Length:

153

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACCTCCT

5'SS Class:

major

3'SS Sequence:

CTGTCCTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTGAG

U12 Branch Point Sequence:

TGAGTCTGAGCC

Flanking Amino Acid:

TSMSPTLLDKDDISDLGSEV

Intron Amino Acid Position:

634

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.52

1.2

66.5

44.9

Major BPS

55.1

0.13

1.5

54.7

43.1

Major PPT

82.3

0.73

0.8

76.6

31.9

Minor 5ss

41.3

-1

3.1

60.4

43.9

Minor BPS

47.1

-0.2

1.8

56.68

41.5

Associated Gene:

Gene:

RFX2

Ensembl Gene ID:

ENSAPLG00000004369

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022144

154282 - 185246

30965

ENSAPLT00000004524

155573 - 181887

26315

ENSAPLT00000025872

153664 - 185246

31583