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Intron Name: Anas_platyrhynchos_platyrhynchos_29_158201_159664_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

158201 - 159664

Intron Length:

1464

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTTAC

5'SS Class:

strong_major

3'SS Sequence:

TCTTCCCGAGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGCAT

U12 Branch Point Sequence:

TCTTCCCGAGCA

Flanking Amino Acid:

LNRVDFANVQEQASWVCQCE

Intron Amino Acid Position:

499

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

1.1

78.4

32.4

Major BPS

0.62

1.4

85.7

34.9

Major PPT

70.3

0.46

66.7

34.1

Minor 5ss

-0.4

2.6

61.1

43.8

Minor BPS

49.8

-0

69.3

42.6

Associated Gene:

Gene:

RFX2

Ensembl Gene ID:

ENSAPLG00000004369

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022144

154282 - 185246

30965

ENSAPLT00000004524

155573 - 181887

26315

ENSAPLT00000025872

153664 - 185246

31583