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Intron Name: Anas_platyrhynchos_platyrhynchos_29_1584725_1586103_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1584725 - 1586103

Intron Length:

1379

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTTGTAGG

5'SS Class:

major

3'SS Sequence:

TTGTTTATTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

AAATTATTAACT

Flanking Amino Acid:

VPTDEARAFAEKNNLSFIET

Intron Amino Acid Position:

137

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.57

1.2

66.5

44.5

Major BPS

90.4

0.7

90.2

19.3

Major PPT

86.1

0.81

0.8

35.3

Minor 5ss

37.6

-1.4

2.4

43.2

43.7

Minor BPS

65.6

0.57

1.6

77.86

37.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011046

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040616

1581441 - 1593694

12254

ENSAPLT00000011498

1580394 - 1593694

13301