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Intron Name: Anas_platyrhynchos_platyrhynchos_29_1586185_1591868_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1586185 - 1591868

Intron Length:

5684

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGTTT

5'SS Class:

strong_major

3'SS Sequence:

GTTCTCATTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TAGGCTCTAACA

Flanking Amino Acid:

VEEAFKNILTEIYRIVSQKQ

Intron Amino Acid Position:

164

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

81.2

33.3

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

81.5

0.71

0.8

78.1

34.9

Minor 5ss

48.8

-0.1

3.1

72.7

44.5

Minor BPS

0.12

1.8

64.93

41.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011046

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040616

1581441 - 1593694

12254

ENSAPLT00000011498

1580394 - 1593694

13301