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Intron Name: Anas_platyrhynchos_platyrhynchos_29_159815_160463_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

159815 - 160463

Intron Length:

649

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCGGA

5'SS Class:

strong_major

3'SS Sequence:

TGCTCTGCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGGTCAT

U12 Branch Point Sequence:

ATCCTGGTCATG

Flanking Amino Acid:

EFPSKIVQTKVGVVSAFAQT

Intron Amino Acid Position:

449

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

72.4

39.5

Major BPS

69.7

0.49

1.3

71.4

45.1

Major PPT

75.3

0.57

0.9

69.1

Minor 5ss

35.7

-1.6

3.3

47.1

48.3

Minor BPS

32.7

-1.5

2.5

37.57

39.9

Associated Gene:

Gene:

RFX2

Ensembl Gene ID:

ENSAPLG00000004369

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025872

153664 - 185246

31583

ENSAPLT00000022144

154282 - 185246

30965

ENSAPLT00000004524

155573 - 181887

26315