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Intron Name: Anas_platyrhynchos_platyrhynchos_29_1623081_1625656_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1623081 - 1625656

Intron Length:

2576

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TGTTGCCCACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTAAC

U12 Branch Point Sequence:

CCGCCTGTAACC

Flanking Amino Acid:

LFTIYVLWTLVSFRYHCQLY

Intron Amino Acid Position:

532

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

77.9

36.8

Major BPS

62.2

0.3

1.2

38.7

Major PPT

68.7

0.42

60.2

41.5

Minor 5ss

36.4

-1.5

3.3

46.1

43.6

Minor BPS

47.6

-0.2

54.71

Associated Gene:

Gene:

MARCHF2

Ensembl Gene ID:

ENSAPLG00000010859

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011313

1594515 - 1626128

31614