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Intron Name: Anas_platyrhynchos_platyrhynchos_29_1633911_1634348_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1633911 - 1634348

Intron Length:

438

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGTTGC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTGTTCCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAAAAAA

U12 Branch Point Sequence:

AAAAAAGTAAGC

Flanking Amino Acid:

EEKETAFQTSDFLRGASPGM

Intron Amino Acid Position:

234

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

1.1

74.3

37.2

Major BPS

47.9

-0.1

0.9

51.7

28.4

Major PPT

83.2

0.75

0.8

77.1

37.1

Minor 5ss

36.9

-1.5

2.6

45.1

42.8

Minor BPS

35.3

-1.1

2.2

42.22

37.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009418

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009801

1630992 - 1636039

5048