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Intron Name: Anas_platyrhynchos_platyrhynchos_29_1637188_1639162_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1637188 - 1639162

Intron Length:

1975

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGGG

5'SS Class:

strong_major

3'SS Sequence:

TCTCTCCCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACCTAAA

U12 Branch Point Sequence:

AGCACCTAAAGG

Flanking Amino Acid:

RLGQTVEPRQEQNQSELESL

Intron Amino Acid Position:

155

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

63.9

42.4

Major BPS

63.9

0.35

63.9

30.3

Major PPT

82.4

0.73

0.7

73.7

31.4

Minor 5ss

23.2

-3.1

3.2

28.7

43.7

Minor BPS

45.2

-0.5

46.97

45.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025050

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027689

1636726 - 1642865

6140