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Intron Name: Anas_platyrhynchos_platyrhynchos_29_1639259_1639473_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1639259 - 1639473

Intron Length:

215

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAGGTGCA

5'SS Class:

major

3'SS Sequence:

TCTGCTTATAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTTAT

U12 Branch Point Sequence:

TTCTGCTTATAA

Flanking Amino Acid:

KERCTCQGYLDKVKAERQKI

Intron Amino Acid Position:

187

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.66

67.7

37.6

Major BPS

76.2

0.65

1.1

65.7

43.2

Major PPT

66.6

0.37

1.1

67.1

37.5

Minor 5ss

31.7

-2.1

3.3

37.8

42.2

Minor BPS

50.9

0.02

2.1

68.25

44.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025050

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027689

1636726 - 1642865

6140