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Intron Name: Anas_platyrhynchos_platyrhynchos_29_1639702_1639870_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1639702 - 1639870

Intron Length:

169

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGTCT

5'SS Class:

strong_major

3'SS Sequence:

TTCTCCCATCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTGCAT

U12 Branch Point Sequence:

ATTGCATTAAGC

Flanking Amino Acid:

SQLSGCEFPQDTGDILGRCE

Intron Amino Acid Position:

263

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.86

0.8

78.2

31.9

Major BPS

66.2

0.4

1.4

77.4

37.3

Major PPT

74.1

0.54

0.8

66.9

34.5

Minor 5ss

33.9

-1.8

3.3

47.6

Minor BPS

55.2

0.14

69.86

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025050

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027689

1636726 - 1642865

6140