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Intron Name: Anas_platyrhynchos_platyrhynchos_29_1640575_1641218_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1640575 - 1641218

Intron Length:

644

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAAGGA

5'SS Class:

major

3'SS Sequence:

ATTTCCCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTGAT

U12 Branch Point Sequence:

TCAGAGTTGATC

Flanking Amino Acid:

ELEETARKLQDASTTALREE

Intron Amino Acid Position:

309

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.7

0.49

1.1

59.6

39.7

Major BPS

72.4

0.56

1.1

63.1

44.4

Major PPT

85.3

0.79

0.7

82.1

29.1

Minor 5ss

28.1

-2.5

3.5

38.8

46.3

Minor BPS

42.3

-0.6

2.2

50.54

40.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025050

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027689

1636726 - 1642865

6140