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Intron Name: Anas_platyrhynchos_platyrhynchos_29_1658272_1660370_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1658272 - 1660370

Intron Length:

2099

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTCGGTATG

5'SS Class:

major

3'SS Sequence:

CTCTCCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACCCAT

U12 Branch Point Sequence:

GGGGCTGTACCC

Flanking Amino Acid:

VHWYPCHHPGAMRFPVLLVL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.31

1.4

63.6

48.1

Major BPS

64.5

0.36

1.2

72.7

34.4

Major PPT

79.6

0.67

0.7

73.3

24.9

Minor 5ss

32.9

-1.9

2.9

34.1

41.5

Minor BPS

40.8

-0.7

2.2

46.85

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024808

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035614

1658212 - 1662518

4307