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Intron Name: Anas_platyrhynchos_platyrhynchos_29_1677800_1678008_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1677800 - 1678008

Intron Length:

209

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGGAGC

5'SS Class:

strong_major

3'SS Sequence:

TTCCGTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTCAC

U12 Branch Point Sequence:

CGCTGCTCACCC

Flanking Amino Acid:

WLTTRVGAAAGLVGSAYRII

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

68.2

Major BPS

69.8

0.49

1.1

71.3

36.7

Major PPT

82.3

0.73

0.8

76.5

32.1

Minor 5ss

33.1

-1.9

3.2

43.9

43.7

Minor BPS

-0.5

2.2

50.68

46.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010040

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010446

1674266 - 1678090

3825