Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_29_1694772_1695822_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1694772 - 1695822

Intron Length:

1051

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAACACA

5'SS Class:

strong_major

3'SS Sequence:

ACTGTTTTTGTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

GCTGTCTTAATA

Flanking Amino Acid:

FGQNLRDRVKLGDESDETAD

Intron Amino Acid Position:

220

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

36.5

Major BPS

0.92

0.9

86.2

29.1

Major PPT

78.4

0.64

0.8

73.4

36.5

Minor 5ss

-1.2

2.9

49.8

46.2

Minor BPS

64.8

0.46

1.4

40.2

Associated Gene:

Gene:

RANBP3

Ensembl Gene ID:

ENSAPLG00000010044

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023782

1686006 - 1727674

41669

ENSAPLT00000010491

1686006 - 1727674

41669