Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_29_1700690_1701192_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1700690 - 1701192

Intron Length:

503

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTA|GTAAGTACA

5'SS Class:

major

3'SS Sequence:

GTTTTGCTTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

GTCCTTTTAATT

Flanking Amino Acid:

QGIISKSLNFKEKSSGFRLK

Intron Amino Acid Position:

101

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.68

76.2

32.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

78.6

0.64

0.9

70.2

41.3

Minor 5ss

37.9

-1.4

2.7

45.5

37.1

Minor BPS

64.6

0.54

1.2

73.2

38.3

Associated Gene:

Gene:

RANBP3

Ensembl Gene ID:

ENSAPLG00000010044

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023782

1686006 - 1727674

41669