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Intron Name: Anas_platyrhynchos_platyrhynchos_29_1717321_1727652_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1717321 - 1727652

Intron Length:

10332

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGCGGG

5'SS Class:

major

3'SS Sequence:

TTTCTTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACAAAA

U12 Branch Point Sequence:

ACAACAACAATT

Flanking Amino Acid:

MADLANEEKPAIAPPVF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

1.1

47.1

Major BPS

51.5

0.04

0.9

57.3

24.9

Major PPT

95.4

1.02

0.5

91.9

18.9

Minor 5ss

34.3

-1.8

3.6

46.4

Minor BPS

41.4

-0.5

1.9

54.99

40.3

Associated Gene:

Gene:

RANBP3

Ensembl Gene ID:

ENSAPLG00000010044

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023782

1686006 - 1727674

41669

ENSAPLT00000010491

1686006 - 1727674

41669