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Intron Name: Anas_platyrhynchos_platyrhynchos_29_17337_18166_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17337 - 18166

Intron Length:

830

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTATT

5'SS Class:

strong_major

3'SS Sequence:

TTCTTCCAAGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTGAT

U12 Branch Point Sequence:

ATTCACTTACTG

Flanking Amino Acid:

EDKQDMAEKERTVPSAEDQE

Intron Amino Acid Position:

348

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

90.9

28.7

Major BPS

0.85

0.9

39.9

Major PPT

74.2

0.54

0.9

71.3

33.4

Minor 5ss

47.2

-0.3

2.7

68.8

41.8

Minor BPS

50.3

-0.1

1.9

60.34

41.5

Associated Gene:

Gene:

ATCAY

Ensembl Gene ID:

ENSAPLG00000004775

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004927

17024 - 31995

14972