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Intron Name: Anas_platyrhynchos_platyrhynchos_29_1738593_1760060_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

1738593 - 1760060

Intron Length:

21468

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGTGA

5'SS Class:

strong_major

3'SS Sequence:

CCTCCCTGCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTTAT

U12 Branch Point Sequence:

TGCAGCTTATGC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

68.4

39.1

Major BPS

67.4

0.43

1.1

57.4

41.4

Major PPT

68.5

0.42

0.9

60.4

35.2

Minor 5ss

42.2

-0.9

3.1

55.7

48.5

Minor BPS

42.5

-0.5

2.2

51.32

45.5

Associated Gene:

Gene:

SLC1A6

Ensembl Gene ID:

ENSAPLG00000010390

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010859

1737716 - 1771515

33800

ENSAPLT00000022117

1737716 - 1771988

34273