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Intron Name: Anas_platyrhynchos_platyrhynchos_29_1756071_1760060_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1756071 - 1760060

Intron Length:

3990

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTCCC

5'SS Class:

strong_major

3'SS Sequence:

CCTCCCTGCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTTAT

U12 Branch Point Sequence:

TGCAGCTTATGC

Flanking Amino Acid:

WMGRHLEKKAAQAEPCPGDR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.8

74.9

35.3

Major BPS

67.4

0.43

1.1

57.4

41.4

Major PPT

68.5

0.42

0.9

60.4

35.2

Minor 5ss

-2.3

2.7

36.3

40.6

Minor BPS

42.5

-0.5

2.2

51.32

45.5

Associated Gene:

Gene:

SLC1A6

Ensembl Gene ID:

ENSAPLG00000010390

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026194

1756037 - 1777975

21939